Upload your own data

On this page you can upload your own data in order to link it to the curated LID genes. Please note that we currently only support plain text file where lines are separated by tabs. You can create such a file with any text editor or export it from spreadsheet programs like Excel.

An example result for a user-defined input has already been pre-computed and is available here, it provides networks connecting LID to tardive dyskinesia (TD). If you want to redo the computation, you can download the TD input file here. The file is tab separated, contains Entrez gene identifiers in column 1 and starts with a header line.

Information about the file
Please select the file you want to upload.
How are the columns in the file separated?	Commas Semi-colons Spaces Tabs
Which column contains the gene/protein identifier?	1 23456789101112131415161718192021222324252627282930313233343536373839404142434445464748495051525354555657585960616263646566676869707172737475767778798081828384858687888990919293949596979899
What identifier system is provided in that column?	Ensembl genes (e.g. ENSG00000109971) Entrez genes (e.g. 1212) HGNC symbols (e.g. PARK2) UniProtKB accessions (e.g. P12313)
Does the file have a header or does the first line already contain data?	First line is header First line contains data
Computational tasks
Which interaction networks should be used?	bioplex,mentha,string_0.9 bioplex mentha string_0.9
Which sub-network categories do you want to compute?	Clusters in full network Input/panel gene network Shortest path network
Submit

Developed at the Institute for Biomedicine at Eurac Research | Last update: 2018-12-07
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